Ian B. Hogue, Seema H. Bajaria, Beth A. Fallert, S hulin Qin, Todd A Reinhart, and Denise E. Kirschner The dual role of dendritic cells in the immune response to human immunodeficiency virus type 1 infection . Journal of General Virology ; 89: 2228 - 2239, 2008.

Todd M. Schaefer, Craig L. Fuller, Shrabani Basu, Beth A. Fallert, Sandra L. Poveda, Sonali K. Sanghavi, Yang-Kyu Choi, Denise E. Kirschner, Eleanor Feingold, Todd A. Reinhart Increased expression of interferon-inducible genes in macaque lung tissues during simian immunodeficiency virus infection. Microbes and Infection - Published by Elsevier SAS, 2006.

Seema H. Bajaria, Denise E. Kirschner. CTL action during HIV-1 is determined via interactions with multiple cell types. Deterministic and Stochastic Models for AIDS Epidemics and HIV Infection with Interventions, Eds: W.Y. Tan and Hulin Wu . Published by World Scientific, Singapore and River Edge, New Jersey, pp. 219-254, 2005.

Ping Ye, Athena P. Kourtis, Denise E. Kirschner. The Thymus During HIV Disease: Role in Pathogenesis and in Immune Recovery. Current HIV Research, vol 2:177-183, 2004.

Seema H. Bajaria, Glenn Webb, Denise E. Kirschner. Predicting Differential Responses to Structured Treatment Interruptions During HAART. Bulletin of Mathematical Biology, 66:1093-1118, 2004.

Ping Ye, Powel Kazanjian, Steven L. Kunkel, and Denise E. Kirschner Lack of good correlation of serum CC-chemokine levels with human immunodeficiency virus-1 disease stage and response to treatment J Lab and Clin Medicine, 143:310-319, 2004.

Ping Ye, Athena Kourtis, Denise Kirschner. Reconstitution of thymic function in HIV-1 patients treated with highly active anti-retroviral therapy. Clin Immunology, 106:95-105, 2003.

Ping Ye and Denise E. Kirschner Measuring Emigration of Human Thymocytes by T-Cell Receptor Excision Circles. Crit Rev Immuno 22:483-498, 2002.

Ping Ye, Athena Kourtis, Denise Kirschner. The effects of different HIV type I strains on human thymic function. AIDS Res Human Retroviruses, 18:1239-1251, 2002

Ping Ye and Denise Kirschner, Reevaluation of T cell receptor excision circles as a measure of human recent thymic emigrants. J Immunology 169:4968-4979, 2002.

Seema H. Bajaria, Glenn Webb, Miles Cloyd, Denise E. Kirscher, Dynamics of Naive and Memory CD4+ T Lymphocytes in HIV-1 Disease Progression J AIDS & Hum Retrov 30:41-58, 2002.

Liancheng Wang, Michael Y. Li, Denise Kirschner, Mathematical analysis of the global dynamics of a model for HTLV-I infection and ATL progression Math Biosciences 179:207-217, 2002.

ERRATA

Jorge X. Velasco-Hernandez, Jose A. Garcia,Denise E. Kirschner , Remarks on Modeling Host-Viral Dynamics and Treatment. in: Volume 125: Mathematical Approaches for Emerging and Reemerging Infectious Diseases Part I: An Introduction to Models, Methods, and Theory
In: Chavez C, Blower S, Van Den Dreische P, Kirschner D, Yakubu A-A. (eds): Mathematical Approaches for Emerging and Reemerging Infectious Diseases: An Introduction to Models, Methods and Theory. Vols. 1 and 2, (Springer-Verlag, New York, 2001).

Sullivan, A, Wigginton, J, Kirschner, D. The Coreceptor mutation CCR5D influences the dynamics of HIV epidemics and is selected for by HIV. PNAS 98:10214-10219, 2001.

Kirschner D, Webb GF and Cloyd M. A model of HIV-1 disease progression based on virus-induced lymph node homing and homing-induced apoptosis of CD4+ T lymphocytes. J. AIDS, 24:352-362, 2000.

Covert D and Kirschner D. Revisiting the early models of the host-pathogen interactions in HIV infection, Comments on Theoretical Biology, 5:383-411, 2000.

Sanchez-Garduno F, Kirschner D and Reynolds J. Key dynamics from a simple model of HIV infection. In: Mathematical Models in Medical and Health Sciences, Horn MA, Simonett G, Webb GF (eds), Vanderbilt University Press, Nashville, pp. 161-196, 1999.

Kirschner D. Dynamics of co-infection with M. tuberculosis and HIV-1. Theor Popul Biol, 55: 94-109, 1999.

Kirschner D and Webb GF. Immunotherapy of HIV-1 infection. J Biol Systems, 6:71-83, 1998.

Kirschner D, Mehr R and Perelson A. The role of the thymus in pediatric HIV-1 infection. J AIDS & Human Retrov, 18:95-109, 1998.

Kirschner D and Morgan J. Solution of the asymmetric mixing problem. SIAM J Appl Math, 58: 725-736, 1998.

Kirschner D and Webb GF. A mathematical model of combined drug therapy of HIV infection. J Theor Med 1:25-34, 1998.

Butler S, Kirschner D and Lenhart S. Optimal control of Chemotherapy Affecting the Infectivity of HIV . In: Arino O, Axelrod D, Kimmel M, (eds): Advances in Mathematical Population Dynamics-Molecules, Cells and Man, Series in Mathematical Biology and Medicine, Vol. 6 (World Scientific, Singapore, 1997) pp. 104-120.

Kirschner D, Lenhart S, Serbin S. Optimizing chemotherapy of HIV infection: Scheduling, amounts and initiation of treatment. J Math Biol 35:775-792, 1997.

Kirschner D and Webb GF. Qualitative differences in HIV chemotherapy between resistance and remission outcomes. Emerging Inf Dis 3:273-283, 1997.

Kirschner D and Webb GF. Understanding drug resistance for montherapy treatment of HIV infection . Bull Math Biol 59:763-786, 1997.

Kirschner D. Using mathematics to understand HIV immune dynamics. AMS Notices pp. 191-202, February 1996.

ERRATA

Kirschner D and Webb GF. A model for treatment strategy in the chemotherapy of AIDS. Bull Math Biol 58:367-390, 1996.

Kirschner D. A diffusion model for AIDS in a closed, heterosexual populations: Estimating rates of infection. SIAM J Appl Math 56:143-166, 1996.

Kirschner D. AIDS in the Heterosexual Population. In: Lakshmikantham V (ed): Proceedings of the First World Congress (Walter de Gruyter Publishers, Berlin, 1995) pp. 3149-3161.

Kirschner D and Perelson A. A Model for the Immune System Response to HIV: AZT Treatment Studies . In: Arino O, Axelrod D, Kimmel M, Langlais M (eds): Mathematical Population Dynamics: Analysis of Hetergeneity and Theory of Epidemics (Wuerz Publishing, Winnipeg, 1995) pp. 295-310.

Perelson A, Kirschner D, De Boer R. The dynamics of HIV infection of CD4+ T cells. Math Biosci 114:81-125, 1993.